C3hc4 type domain

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August undefined, 2024

WebThe C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3) ... The table below shows the structures on which the zf-C3HC4 domain has been found. There are 37 instances of this domain found in the PDB. WebThe PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression.

RCSB PDB - 3CH4: The Crystal Structure of Human …

WebThere are two different variants, the C3HC4-type and a C3H2C3-type, which are clearly related despite the different cysteine/histidine pattern. The latter type is sometimes referred to as 'RING-H2 finger'. The RING domain is a protein interaction domain that has been implicated in a range of diverse biological processes. WebNational Center for Biotechnology Information grace gynecology lafayette la

C3HC4-type RING finger domain binding SGD

WebMar 25, 1994 · Abstract. A recently identified sequence motif, referred to as "C3HC4" (also "RING finger" and "A Box") for its distinctive pattern of putative metal-binding residues, … In molecular biology, a RING (short for Really Interesting New Gene) finger domain is a protein structural domain of zinc finger type which contains a C3HC4 amino acid motif which binds two zinc cations (seven cysteines and one histidine arranged non-consecutively). This protein domain contains 40 to 60 amino acids. Many proteins containing a RING finger play a key role in the ubiquitination pathway. WebMar 23, 2024 · sence of the C3HC4-type RING ﬁnger domain. Altogether, 16 CaRHC candidate genes from the . RHC family were found and were designated system-atically from CaRHC1 to CaRHC16 in this study. grace hagenow

(PDF) Decreased grain size1, a C3HC4-type RING protein, influences ...

Genome-wide identification, characterisation and expression of C3HC4 …

WebMar 10, 2024 · sence of the C3HC4-type RING ﬁnger domain. Altogether, 16 CaRHC candidate genes from the . RHC family were found and were designated system-atically from CaRHC1 to CaRHC16 in this study. chillicothe ace hardwareWebJun 5, 2014 · C3HC4-type RING finger proteins constitute a large family in the plant kingdom and play important roles in various physiological processes of plant life. In this … chillicothe adventist

"WebJan 15, 2008 · RanBP-type and C3HC4-type zinc finger-containing protein 1: BLAST Add. Sequence: Modified residue: 50: UniProt: Phosphoserine Combined sources. Sequence: S: Modified residue (large scale data) 50: ... 3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) 1 hit; 2.30.30.380 Zn-finger domain of Sec23/24 1 hit; InterPro. View protein in … " - C3hc4 type domain

C3hc4 type domain

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WebThe molecular formula C3H4 (molar mass: 40.06 g/mol, exact mass: 40.0313 u) may refer to: Cyclopropene, a cyclic alkene. Methylacetylene, a common alkyne. Propadiene, an … WebZinc finger, C3HC4 type (RING finger) domain containing protein Imported. Organism names. Organism. Triticum aestivum (Wheat) Imported. ... 3.30.40.10 Zinc/RING finger domain, C3HC4 (zinc finger) 1 hit; InterPro. View protein in InterPro; IPR022143 DUF3675; IPR033275 MARCH-like; IPR011016 Znf_RING-CH; IPR013083 Znf_RING/FYVE/PHD;

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WebSep 29, 2024 · The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid. Many … THE NCBI Taxonomy database allows browsing of the taxonomy tree, which … Saccharomyces cerevisiae S288C Taxonomy ID: 559292 (for references in … Caenorhabditis elegans Taxonomy ID: 6239 (for references in articles please use … WebThe C3HC4-type zinc finger is a variant of RING finger, is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X …

WebProtein Family : zinc finger, C3HC4 type domain containing protein, expressed 123348243. Method ID: 5275: Method Name: Viridiplantae: Sequence Alignment: ... (1 of 1) PF00092//PF13639 - von Willebrand factor type A domain (VWA) // Ring finger domain (zf-RING_2) G. max Wm82.a2.v1: 3089 Chr07: 44277462-44280550: Glyma.09G017200 (1 … WebApr 14, 2024 · In addition, 12 types of cis-elements were related to metabolism regulation and development. (Figure 5 and Table S4). ... The zf-C3HC4 domain is a zinc-finger domain that may be involved in both DNA-binding and protein–protein interaction functions . This implies that soybean proteins with zf-C3HC4 domains may play important roles in ...

WebSep 1, 2009 · To identify the C3HC4-type RING finger genes in rice, the protein family ID PF00097 was used to search the rice genome annotation database in TIGR. The … WebIPR025192: Succinate dehydogenase/fumarate reductase N-terminal; PTHR11921: ; PTHR11921:SF29: ; IPR004489: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; IPR017900: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; IPR017896: 4Fe-4S ferredoxin-type, iron-sulphur binding domain; IPR009051: Alpha-helical …

WebNov 13, 2024 · Furthermore, RANBP2-Type and C3HC4-Type Zinc-Finger Containing 1 (RBCK1), Ubiquitin Like With PHD And Ring Finger Domains 1 (UHRF1), and Roquin-1 …

http://amigo.geneontology.org/amigo/term/GO:0055131 chillicothe acute care clinic ohioWebThe human topoisomerase I- and p53-binding protein topors contains a highly conserved N-terminal C3HC4-type RING domain that is homologous to the RING domains of known E3 ubiquitin ligases. We demonstrate that topors functions in vitro as a RING-dependent E3 ubiquitin ligase with the E2 enzymes UbcH5a, UbcH5c, and UbcH6 but not with UbcH7 ... chillicothe adenaWebSep 1, 2009 · The C3HC4-type RING finger family members in rice. To identify the C3HC4-type RING finger genes in rice, the protein family ID PF00097 was used to search the rice genome annotation database in TIGR. The domain score greater than trusted cut-off and the total HMM score greater than 50 were used to specify the search criteria by the TIGR … chillicothe addiction treatment centerWebC3HC4-type RING finger domain binding Binding to a C3HC4-type zinc finger domain of a protein. The C3HC4-type zinc finger is a variant of RING finger, is a cysteine-rich domain … gracehackshttp://smart.embl.de/smart/do_annotation.pl?DOMAIN=SM00184 chillicothe advertiserWebMar 1, 2024 · DGS1 encodes a protein with a 7-transmembrane domain and C3HC4 type RING domain. It was widely expressed, especially in young tissues. DGS1 is a membrane-located protein. chillicothe adult probationWebHere, we named a subgroup of the ANK C3HC4-type RF proteins the XB3-like proteins, which contain two to seven N-terminal ANK repeats and a conserved C3HC4-type RF domain. Recent draft genome sequences for plants offer the opportunity to investigate the XB3-like genes of plants using genomes that have only recently been completely … grace hagen obituary